hash_case.h

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//Copyright 2008-2010 Thomas A Caswell
//tcaswell@uchicago.edu
//http://jfi.uchicago.edu/~tcaswell
//
//This program is free software; you can redistribute it and/or modify
//it under the terms of the GNU General Public License as published by
//the Free Software Foundation; either version 3 of the License, or (at
//your option) any later version.
//
//This program is distributed in the hope that it will be useful, but
//WITHOUT ANY WARRANTY; without even the implied warranty of
//MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
//General Public License for more details.
//
//You should have received a copy of the GNU General Public License
//along with this program; if not, see <http://www.gnu.org/licenses>.
//
//Additional permission under GNU GPL version 3 section 7
//
//If you modify this Program, or any covered work, by linking or
//combining it with MATLAB (or a modified version of that library),
//containing parts covered by the terms of MATLAB User License, the
//licensors of this Program grant you additional permission to convey
//the resulting work.

#ifndef HASH_CASE
#define HASH_CASE
#include <vector>
#include <list>

#include "part_def.h"






namespace utilities{
class Array;

class Histogram2D;
class Wrapper_out;
class Wrapper_in;
class Cell;
class Counted_vector;
class Accum_case;
class Wrapper_in;
class Generic_wrapper;
class Filter;


}

namespace tracking{
class Track_shelf;
class Hash_shelf;
class track_list;
class Master_box;

class Corr;
class Corr_case;
class Accumulator;

class hash_case{

public:
  Hash_shelf * return_shelf(int n) const{
    return h_case_.at(n);
  }

  hash_case();
  
  

    
  void  init(Master_box & mb,const utilities::Tuplef & dims, 
             float ppb, int frames);
  
  void init(utilities::Wrapper_in & w_in , utilities::Filter & filt, float ppb)  ;
  

  void print() const;
  
  void pass_fun_to_part(void(particle::*fun)());

  void pass_fun_to_part(void(particle::*fun)() const)const;



  void pass_fun_to_shelf(void(Hash_shelf::*fun)());

  void pass_fun_to_shelf(void(Hash_shelf::*fun)()const)const;

  unsigned int get_num_frames() const
  {
    return h_case_.size();
  }
  
  
  void output_to_wrapper(utilities::Wrapper_out &) const;
  
  void compute_corr(tracking::Corr &) const ;

    
  unsigned int compute_corr(tracking::Corr_case &) const ;

    
  void compute_accum(Accumulator & in)const;

  void compute_accum(utilities::Accum_case & )const;
  

  void fill_in_neighborhood();

  int get_avg_dtime()const;
  
  float get_avg_temp()const;
  
  
  ~hash_case();

#ifdef TRACKING_FLG

  void init(float box_side_len,
            const utilities::Wrapper_in & wrapper,
            Track_shelf & tracks,
            utilities::Filter & filt,
            int min_trk_length);

  
  void link(float max_range, Track_shelf& tracks);

  void compute_mean_disp();

#endif
  

protected:
  std::vector<Hash_shelf*> h_case_;


  
#ifdef TRACKING_FLG   

  void fill_pos_link_next(std::list<particle_track*>* tlist, 
                          std::vector<Hash_shelf*>::iterator in_it, float max_disp);

#endif
  
  bool inited_;
            
  bool own_particles_;
  
};


}


#endif